BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028F07SP1|AL428942
(837 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1118 1648 0.0
>3x_Contig1118
Length = 5540
Score = 1648 bits (830), Expect = 0.0
Identities = 834/836 (99%)
Strand = Plus / Plus
Query: 2 agattgtatactgtcccgagtattatggtttggtatggagttgaatataacttgtcttca 61
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 4087 agattgtatactgtcccgagtagtatggtttggtatggagttgaatataacttgtcttca 4146
Query: 62 tttgaactaacgtcaacgtgcttagtcttagcaaatatatctagttccacgtcttttata 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4147 tttgaactaacgtcaacgtgcttagtcttagcaaatatatctagttccacgtcttttata 4206
Query: 122 ccaatagtgaagagacttggattaaacgcagtcgctgtgatatcgaatactaattcatcc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4207 ccaatagtgaagagacttggattaaacgcagtcgctgtgatatcgaatactaattcatcc 4266
Query: 182 aacgaaactagaacgttatccatggccaacaattggaaatcgtgtaattctttgttggtt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4267 aacgaaactagaacgttatccatggccaacaattggaaatcgtgtaattctttgttggtt 4326
Query: 242 gccagtaggaatccagaaatgaatccaagagtcaatagggaggccacgatgaaagagaag 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4327 gccagtaggaatccagaaatgaatccaagagtcaatagggaggccacgatgaaagagaag 4386
Query: 302 taaacgaaatttttaaacttagaccatgaacccttcttggtgtaaaagttgtggggagaa 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4387 taaacgaaatttttaaacttagaccatgaacccttcttggtgtaaaagttgtggggagaa 4446
Query: 362 aaatcaccgtagaaatcagatcttttcctgctcactcttttattcttcaaaggagtatac 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4447 aaatcaccgtagaaatcagatcttttcctgctcactcttttattcttcaaaggagtatac 4506
Query: 422 tcactggcttgattgaaataaggtaattgggacgaaccaagtccctttccttcatttgat 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4507 tcactggcttgattgaaataaggtaattgggacgaaccaagtccctttccttcatttgat 4566
Query: 482 ctctctgcattattcggatctccgtagaaaaatccttgtgattctacatcttccgttcca 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4567 ctctctgcattattcggatctccgtagaaaaatccttgtgattctacatcttccgttcca 4626
Query: 542 tcgtcgagttctgagaacctccttccaactctagcattgttaggaactatgctacctccg 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4627 tcgtcgagttctgagaacctccttccaactctagcattgttaggaactatgctacctccg 4686
Query: 602 ttatagtaaaacatcgactcaatatcatcaccatcttcgtccgcgtacgaatgttcatca 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4687 ttatagtaaaacatcgactcaatatcatcaccatcttcgtccgcgtacgaatgttcatca 4746
Query: 662 taattggtttgattgtgatatgtcagtccgtgaatatcactgatatccgaattggattgg 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4747 taattggtttgattgtgatatgtcagtccgtgaatatcactgatatccgaattggattgg 4806
Query: 722 atatcgttattatccaaatcgatttcatcatctccatatccactatggttatcatttggt 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4807 atatcgttattatccaaatcgatttcatcatctccatatccactatggttatcatttggt 4866
Query: 782 tcatattgaatatkgttgtcggaggagtacgttccacgttgagaagcagcattgga 837
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4867 tcatattgaatatggttgtcggaggagtacgttccacgttgagaagcagcattgga 4922
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6405
Number of Sequences: 1807
Number of extensions: 6405
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 837
length of database: 10,358,551
effective HSP length: 16
effective length of query: 821
effective length of database: 10,329,639
effective search space: 8480633619
effective search space used: 8480633619
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)